Table 3 Nucleotide content and gene count levels of the genome
From: Non contiguous-finished genome sequence and description of Microbacterium gorillae sp. nov.
Attribute | Value | % of totala |
|---|---|---|
Genome size (bp) | 3,692,770 | 100 |
DNA coding (bp) | 3,396,745 | 92 |
DNA G + C (bp) | 2,558,287 | 69.3 |
DNA scaffolds | 14 | |
Total genes | 3,566 | 100 |
Protein coding genes | 3,505 | 98.3 |
RNA genes | 61 | 1.71 |
Pseudo genes | 226 | 6.33 |
Genes in internal clusters | ND | ND |
Genes with function prediction | 2,412 | 68.8 |
Genes assigned to COGs | 2,202 | 62.8 |
Genes with Pfam domains | 0 | 0 |
Genes with signals peptides | 365 | 10.4 |
Genes with transmembrane helices | 843 | 24.1 |
CRISPR repeats | 0 | 0 |