Table 4 Number of genes associated with general COG functional categories
Code | Strains | Description | |||||
|---|---|---|---|---|---|---|---|
FNO12 | FNO24 | FNO190 | |||||
Value | % age | Value | % age | Value | % age | ||
J | 152 | 8.00 | 152 | 7.99 | 152 | 8.00 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.05 | 1 | 0.05 | 1 | 0.05 | RNA processing and modification |
K | 47 | 2.47 | 47 | 2.47 | 47 | 2.47 | Transcription |
L | 74 | 3.89 | 74 | 3.89 | 74 | 3.89 | Replication, recombination and repair |
B | 0 | 0 | 0 | 0 | 0 | 0 | Chromatin structure and dynamics |
D | 16 | 0.84 | 16 | 0.84 | 16 | 0.84 | Cell cycle control, Cell division, chromosome partitioning |
V | 17 | 0.84 | 17 | 0.89 | 17 | 0.84 | Defense mechanisms |
T | 16 | 0.84 | 16 | 0.84 | 16 | 0.84 | Signal transduction Mechanisms |
M | 116 | 6.10 | 116 | 6.10 | 115 | 6.05 | Cell wall/membrane biogenesis |
N | 10 | 0.53 | 10 | 0.53 | 10 | 0.53 | Cell motility |
U | 36 | 1.89 | 36 | 1.89 | 36 | 1.89 | Intracellular trafficking and secretion |
O | 68 | 3.58 | 68 | 3.57 | 68 | 3.58 | Posttranslational modification, protein turnover, chaperones |
C | 94 | 4.94 | 94 | 4.94 | 94 | 4.94 | Energy production and conversion |
G | 85 | 4.47 | 85 | 4.47 | 87 | 4.58 | Carbohydrate transport and metabolism |
E | 182 | 9.57 | 182 | 9.56 | 184 | 9.68 | Amino acid transport and metabolism |
F | 57 | 3.00 | 57 | 3.00 | 57 | 3.00 | Nucleotide transport and metabolism |
H | 80 | 4.21 | 80 | 4.20 | 80 | 4.21 | Coenzyme transport and metabolism |
I | 73 | 3.84 | 73 | 3.84 | 73 | 3.84 | Lipid transport and metabolism |
P | 74 | 3.89 | 74 | 3.89 | 76 | 4.00 | Inorganic ion transport and metabolism |
Q | 40 | 2.10 | 40 | 2.10 | 40 | 2.10 | Secondary metabolites biosynthesis, transport and catabolism |
R | 173 | 9.10 | 173 | 9.09 | 174 | 9.15 | General function prediction only |
S | 99 | 5.21 | 99 | 5.20 | 98 | 5.16 | Function unknown |
- | 574 | 30.19 | 576 | 30.27 | 575 | 30.24 | Not in COGs |