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Table 4 Number of genes associated with general COG functional categories

From: High-quality draft genome sequence and description of Haemophilus massiliensis sp. nov.

Code

Value

% of totala

Description

J

160

6.90

Translation

A

1

0.04

RNA processing and modification

K

150

6.47

Transcription

L

131

5.65

Replication, recombination and repair

B

0

0

Chromatin structure and dynamics

D

28

1.21

Cell cycle control, mitosis and meiosis

V

37

1.60

Defense mechanisms

T

46

1.98

Signal transduction mechanisms

M

135

5.82

Cell wall/membrane biogenesis

N

6

0.26

Cell motility

W

9

0.39

Extracellular structures

U

58

2.50

Intracellular trafficking and secretion

O

109

4.70

Posttranslational modification, protein turnover, chaperones

C

163

7.03

Energy production and conversion

G

228

9.83

Carbohydrate transport and metabolism

E

234

10.09

Amino acid transport and metabolism

F

63

2.72

Nucleotide transport and metabolism

H

117

5.05

Coenzyme transport and metabolism

I

62

2.67

Lipid transport and metabolism

P

152

6.55

Inorganic ion transport and metabolism

Q

34

1.47

Secondary metabolites biosynthesis, transport and catabolism

R

258

11.13

General function prediction only

S

174

7.50

Function unknown

-

226

9.53

Not in COGs

  1. aThe total is based on the total number of protein coding genes in the annotated genome