Table 4 Number of genes associated with the general COG functional categories
From: The complete genome sequence of Eubacterium limosum SA11, a metabolically versatile rumen acetogen
Code | Value | % of totala | Description |
|---|---|---|---|
J | 150 | 3.94 | Translation |
A | 0 | 0.00 | RNA processing and modification |
K | 314 | 8.25 | Transcription |
L | 123 | 3.23 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 26 | 0.68 | Cell cycle control, mitosis and meiosis |
V | 87 | 2.29 | Defense mechanisms |
T | 168 | 4.42 | Signal transduction mechanisms |
M | 139 | 3.65 | Cell wall/membrane biogenesis |
N | 18 | 0.47 | Cell motility |
U | 15 | 0.39 | Intracellular trafficking and secretion |
O | 72 | 1.89 | Posttranslational modification, protein turnover, chaperones |
C | 187 | 4.91 | Energy production and conversion |
G | 180 | 4.73 | Carbohydrate transport and metabolism |
E | 272 | 7.15 | Amino acid transport and metabolism |
F | 65 | 1.71 | Nucleotide transport and metabolism |
H | 107 | 2.81 | Coenzyme transport and metabolism |
I | 52 | 1.37 | Lipid transport and metabolism |
P | 117 | 3.07 | Inorganic ion transport and metabolism |
Q | 26 | 0.68 | Secondary metabolites biosynthesis, transport and catabolism |
R | 266 | 6.99 | General function prediction only |
S | 161 | 4.23 | Function unknown |
- | 1260 | 33.11 | Not in COGs |