Table 2 Genome sequencing project information
From: Insights into the single cell draft genome of “Candidatus Achromatium palustre”
MIGS ID | Property | Term |
|---|---|---|
MIGS 31 | Finishing quality | Draft |
MIGS-28 | Library used | TruSeq DNA PCR-Free Library Prep Kit |
MIGS 29 | Sequencing platform | Illumina MiSeq v2 |
MIGS 31.2 | Fold coverage | 375x |
MIGS 30 | Assembler | Spades 3.5.0 |
MIGS 32 | Gene calling methods | IMG: tRNAScan-SE-1.23, BLAST search for rRNAs, CRT for CRISPRS, infernal and rfam_scan for other rRNAs, GeneMark for protein coding genes |
Locus Tag | AC002 | |
Genbank ID | 3742159 | |
GenBank Date of Release | 1 July, 2015 | |
GOLD ID | Ga0065144 | |
BIOPROJECT | PRJNA251325 | |
MIGS 13 | Source Material Identifier | Environmental sample |
Project relevance | Metabolic pathways, non-pathogenic |