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Table 1 Classification and general features of P. agglomerans MP2 and P. vagans MP7

From: Draft genome sequences of Pantoea agglomerans and Pantoea vagans isolates associated with termites

MIGS ID

Property

Pantoea agglomerans MP2

Evidence codea

Pantoea vagans MP7

Evidence codea

 

Classification

Bacteria

NAS [25]

Bacteria

NAS [25]

Proteobacteria

NAS [23]

Proteobacteria

NAS [23]

Gammaproteobacteria

NAS [24, 51]

Gammaproteobacteria

NAS [24, 51]

Enterobacteriaceae

NAS [42, 44]

Enterobacteriaceae

NAS [42, 44]

Enterobacteriales

NAS [25]

Enterobacteriales

NAS [25]

Pantoea

NAS [9, 26]

Pantoea

NAS [9, 26]

Pantoea agglomerans

NAS [26, 39]

Pantoea vagans

NAS [10]

 

Gram stain

Negative

NAS [26]

Negative

NAS [10]

 

Cell shape

Straight rods

NAS [26]

Short rods

NAS [10]

 

Motility

Motile

NAS [26]

Motile

NAS [10]

 

Sporulation

Non-sporeforming

NAS [26]

Non-sporeforming

NAS [10]

 

Temperature range

Mesophile

NAS [26]

Mesophile

NAS [10]

 

Optimum temperature

30 °C

NAS [54]

30 °C

NAS [54]

 

pH range; Optimum

4 - 8; 5–6

IDA

4 - 9; 5 -6

IDA

 

Carbon source

D-Glucose, L-arabinose, D-galactose, maltose, D-mannitol, D-mannose, L-rhamnose, sucrose, trehalose, D-xylose

NAS [54]

Malonic acid, L-ornithine, D-glucose, L-arabinose, D-ribose, D-galactose, sucrose, maltose

NAS [10]

 

Energy source

Chemoorganotroph

NAS [54]

Chemoorganotroph

NAS [54]

 

Terminal electron receptor

Not available

 

Not available

 

MIGS-6

Habitat

Termite

IDA

Termite

IDA

MIGS-6.3

Salinity

Not available

 

Not available

 

MIGS-22

Oxygen requirement

Facultative anaerobic

NAS [54]

Facultative anaerobic

NAS [54]

MIGS-15

Biotic relationship

Potential termite symbiont

 

Potential termite symbiont

 

MIGS-14

Pathogenicity

Not available

 

Not available

 

MIGS-4

Geographic location

Pretoria, South Africa

 

Mookgophong, South Africa

 

MIGS-5

Sample collection

January 2010

 

January 2010

 

MIGS-4.1 MIGS-4.2

Latitude – Longitude

S25 43 45.6 E28 14 09.9

 

S24 40 30.5 E28 47 50.4

 

MIGS-4.3

Depth

N/A

 

N/A

 

MIGS-4.4

Altitude

1344 m

 

1046 m

 
  1. IDA Inferred from Direct Assay, TAS Traceable Author Statement (i.e., a direct report exists in the literature), NAS Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are derived from the Gene Ontology project
  2. aEvidence codes