Skip to main content

Table 5 Genome statistics comparison with available genomes of Shimia species

From: Genome sequence of Shimia str. SK013, a representative of the Roseobacter group isolated from marine sediment

Genome name Shimia str. SK013 S. haliotis S. marina
DSM 28453 DSM 26895
Genome Size 4,049,808 3,995,969 4,061,252
Gene Count 4,028 3,953 3,992
Scaffold Count 28 22 32
G + C content (%) 57.22 58.04 57.34
RNA Count 47 58 61
rRNA Count 3 5 5
COG Count 2,860 2,751 2,776
COG (%) 71.00 69.59 69.54
Pfam Count 3,350 3,300 3,365
Pfam (%) 83.17 83.48 84.29
TIGRfam Count 1,148 1,155 1,172
TIGRfam (%) 28.50 29.22 29.36
IMG Pathway Count 223 213 207
IMG Pathway (%) 5.54 5.39 5.19
Horizontally Transferred Count 223 158 135
Horizontally Transferred (%) 5.54 4.00 3.38
\