Table 5 Genome statistics comparison with available genomes of Shimia species
Genome name | Shimia str. SK013 | S. haliotis | S. marina |
|---|---|---|---|
DSM 28453 | DSM 26895 | ||
Genome Size | 4,049,808 | 3,995,969 | 4,061,252 |
Gene Count | 4,028 | 3,953 | 3,992 |
Scaffold Count | 28 | 22 | 32 |
G + C content (%) | 57.22 | 58.04 | 57.34 |
RNA Count | 47 | 58 | 61 |
rRNA Count | 3 | 5 | 5 |
COG Count | 2,860 | 2,751 | 2,776 |
COG (%) | 71.00 | 69.59 | 69.54 |
Pfam Count | 3,350 | 3,300 | 3,365 |
Pfam (%) | 83.17 | 83.48 | 84.29 |
TIGRfam Count | 1,148 | 1,155 | 1,172 |
TIGRfam (%) | 28.50 | 29.22 | 29.36 |
IMG Pathway Count | 223 | 213 | 207 |
IMG Pathway (%) | 5.54 | 5.39 | 5.19 |
Horizontally Transferred Count | 223 | 158 | 135 |
Horizontally Transferred (%) | 5.54 | 4.00 | 3.38 |