Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 194 | 6.02 | Translation, ribosomal structure and biogenesis |
A | n.a. | n.a. | RNA processing and modification |
K | 221 | 6.86 | Transcription |
L | 90 | 2.80 | Replication, recombination and repair |
B | 2 | 0.06 | Chromatin structure and dynamics |
D | 25 | 0.78 | Cell cycle control, Cell division, chromosome partitioning |
V | 61 | 1.89 | Defense mechanisms |
T | 126 | 3.91 | Signal transduction mechanisms |
M | 178 | 5.53 | Cell wall/membrane biogenesis |
N | 50 | 1.55 | Cell motility |
U | 41 | 1.27 | Intracellular trafficking and secretion |
O | 156 | 4.84 | Posttranslational modification, protein turnover, chaperones |
C | 238 | 7.39 | Energy production and conversion |
G | 203 | 6.30 | Carbohydrate transport and metabolism |
E | 388 | 12.05 | Amino acid transport and metabolism |
F | 87 | 2.70 | Nucleotide transport and metabolism |
H | 174 | 5.40 | Coenzyme transport and metabolism |
I | 186 | 5.78 | Lipid transport and metabolism |
P | 143 | 4.44 | Inorganic ion transport and metabolism |
Q | 130 | 4.04 | Secondary metabolites biosynthesis, transport and catabolism |
R | 313 | 9.72 | General function prediction only |
S | 192 | 5.96 | Function unknown |
- | 1168 | 29.00 | Not in COGs |