Skip to main content

Table 1 Classification and general features of Shimia str. SK013 in accordance with the MIGS recommendations published by the Genome Standards Consortium [46]

From: Genome sequence of Shimia str. SK013, a representative of the Roseobacter group isolated from marine sediment

MIGS ID Property Term Evidence codea
  Classification Domain Bacteria TAS [47]
   Phylum Proteobacteria TAS [48]
   Class Alphaproteobacteria TAS [49, 50]
   Order Rhodobacterales TAS [50, 51]
   Family Rhodobacteraceae TAS [50, 51]
   Genus Shimia TAS [8]
   Species Shimia TAS [8]
   Strain SK013 (IMG2608642164) TAS [7]
  Gram stain negative IDA
  Cell shape Rod shaped IDA
  Motility Motile IDA
  Sporulation none NAS
  Temperature range Mesophile; 10–35 °C IDA
  Optimum temperature 25–30 °C IDA
  pH range; Optimum 5–9; 7 IDA
  Carbon source Sugars, amino acids IDA
MIGS-6 Habitat Marine IDA
MIGS-6.3 Salinity 0–5 % NaCl (w/v) IDA
MIGS-22 Oxygen requirement Aerobic IDA
MIGS-15 Biotic relationship Unknown NAS
MIGS-14 Pathogenicity non-pathogen NAS
MIGS-4 Geographic location North Sea/Skagerrak area IDA
MIGS-5 Sample collection July 24, 2011 IDA
MIGS-4.1 Latitude 57°36.77‘N IDA
MIGS-4.2 Longitude 08°35.41‘E IDA
MIGS-4.3 Depth 114 m below sea level IDA
MIGS-4.4 Altitude Unknown  
  1. aEvidence codes - IDA Inferred from Direct Assay, TAS Traceable Author Statement (i.e., a direct report exists in the literature), NAS Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [52]
\