Table 4 Number of genes associated with general COG functional categories
Code | Value | % agea | Description |
|---|---|---|---|
J | 133 | 4.69 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03 | RNA processing and modification |
K | 51 | 1.79 | Transcription |
L | 71 | 2.50 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 14 | 0.49 | Cell cycle control, Cell division, chromosome partitioning |
V | 27 | 0.95 | Defense mechanisms |
T | 100 | 3.53 | Signal transduction mechanisms |
M | 98 | 3.45 | Cell wall/membrane biogenesis |
N | 50 | 1.76 | Cell motility |
U | 23 | 0.81 | Intracellular trafficking and secretion |
O | 59 | 2.08 | Posttranslational modification, protein turnover, chaperones |
C | 79 | 2.78 | Energy production and conversion |
G | 55 | 1.94 | Carbohydrate transport and metabolism |
E | 109 | 3.85 | Amino acid transport and metabolism |
F | 50 | 1.74 | Nucleotide transport and metabolism |
H | 93 | 3.28 | Coenzyme transport and metabolism |
I | 41 | 1.44 | Lipid transport and metabolism |
P | 54 | 1.91 | Inorganic ion transport and metabolism |
Q | 9 | 0.31 | Secondary metabolites biosynthesis, transport and catabolism |
R | 62 | 2.18 | General function prediction only |
S | 36 | 1.27 | Function unknown |
- | 1595 | 58.17 | Not in COGs |