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Table 3 Genome statistics

From: Draft genome sequence of chloride-tolerant Leptospirillum ferriphilum Sp-Cl from industrial bioleaching operations in northern Chile

Attribute Value % of Totala
Genome size (bp) 2,475,669 100.00
DNA coding (bp) 2,270,652 91.71
DNA G + C (bp) 1,347,012 54.41
DNA scaffolds 74 100.00
Total genesb 2,882 100.00
Protein coding genes 2,834 99.33
RNA genesc 48 1.66
Pseudo genesd NA NA
Genes in internal clusters 1,294 45.65
Genes with function prediction 1,631 56.59
Genes assigned to COGs 1,239 41.83
Genes with Pfam domains 1,778 61.69
Genes with signal peptides 221 7.66
Genes with transmembrane helices 633 21.96
CRISPR repeats 0 0.00
  1. a) The total is based on either the size of the genome in base pairs or the total number of genes in theannotated genome.
  2. b) Includes tRNA, tmRNA, rRNA.
  3. c) Includes 23S, 16S and 5S rRNA.
  4. d) n.d.: not determined