Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 159 | 5.4 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 151 | 5.2 | Transcription |
L | 158 | 5.4 | Replication, recombination and repair |
B | 2 | 0.0 | Chromatin structure and dynamics |
D | 26 | 0.9 | Cell cycle control, Cell division, chromosome partitioning |
V | 26 | 0.9 | Defense mechanisms |
T | 104 | 3.6 | Signal transduction mechanisms |
M | 127 | 4.3 | Cell wall/membrane biogenesis |
N | 49 | 1.7 | Cell motility |
U | 45 | 1.5 | Intracellular trafficking and secretion |
O | 110 | 3.8 | Posttranslational modification, protein turnover, chaperones |
C | 173 | 5.9 | Energy production and conversion |
G | 178 | 6.1 | Carbohydrate transport and metabolism |
E | 261 | 8.9 | Amino acid transport and metabolism |
F | 64 | 2.2 | Nucleotide transport and metabolism |
H | 129 | 4.4 | Coenzyme transport and metabolism |
I | 101 | 3.5 | Lipid transport and metabolism |
P | 106 | 3.6 | Inorganic ion transport and metabolism |
Q | 73 | 2.5 | Secondary metabolites biosynthesis, transport and catabolism |
R | 284 | 9.7 | General function prediction only |
S | 205 | 7.0 | Function unknown |
- | 717 | 24.5 | Not in COGs |