Table 1 Classification and general features of two Xanthomonas arboricola strains according to the MIGS recommendation [19] published by the Genomic Standards Consortium [53]

Classification

Domain: Bacteria

TAS [54]

Phylum: Proteobacteria

TAS [55]

Class: Gammaproteobacteria

TAS [56–58]

Order: Lysobacterales

TAS [57, 59, 60]

Family: Lysobacteraceae

TAS [57, 58, 60]

Genus: Xanthomonas

TAS [1]

Species: Xanthomonas arboricola

IDA

Strain: CITA 44, IVIA 2626.1

IDA

Gram stain

Negative

TAS [61]

Cell shape

Rod-shaped

IDA

Motility

Motile

IDA

Sporulation

Non-sporulating

IDA

Temperature range

4-37 °C

TAS [1]

Optimum temperature

27 °C

IDA

pH range; Optimum

7.5-8.5

TAS [61]

Carbon source

α-D-glucose, α-keto glutaric acid, bromosuccinic acid, D-cellobiose, D-fructuose, D-mannose, D-psicose, D-saccharic acid (only strain CITA 44), D-threalose, Dextrin (only strain IVIA 2626.1), glycyl-L-glutamic acid, L-glutamic acid, L- proline (only strain IVIA 2626.1), L-serine, pyruvic acid methyl ester, succinic acid, succinic acid mono-methyl ester, Sucrose, tween 40

IDA

Energy metabolism

Chemoorganotrophic

TAS [1]

MIGS-6

Habitat

Plants

IDA TAS [1]

MIGS-6.3

Salinity

0-6.0 % NaCl

TAS [1]

MIGS-10

Extrachromosomal elements

None in CITA 44, one in IVIA 2626.1

IDA, TAS [12]

MIGS-22

Oxygen requirement

Aerobic

IDA

MIGS-15

Biotic relationship

Epiphyte and endophyte

TAS [1]

MIGS-14

Pathogenicity

CITA 44 is avirulent; IVIA 2626.1 is virulent on almond, peach and European plum

IDA

Host

Mahaleb cherry (P. mahaleb) (CITA 44) and plum (P. salicina) (IVIA 2626.1)

IDA

Host taxa ID

129217 (CITA 44) and 88123 (IVIA 2626.1)

Isolation source

Leaf

IDA

MIGS-4

Geographic location

Spain

IDA

MIGS-5

Sample collection

2002 (IVIA 2626.1) and 2009 (CITA 44)

IDA

MIGS-4.1

Latitude

Unknown

NAS

MIGS-4.2

Longitude

Unknown

NAS

MIGS-4.4

Altitude

Unknown

NAS