Table 5 Number of genes associated with general COG functional categories
From: Complete genome sequence of the potato pathogen Ralstonia solanacearum UY031
Code | Value | % | Description |
|---|---|---|---|
J | 160 | 3.4 | Translation, ribosomal structure and biogenesis |
A | 2 | <0.1 | RNA processing and modification |
K | 273 | 5.8 | Transcription |
L | 240 | 5.1 | Replication, recombination and repair |
B | 3 | <0.1 | Chromatin structure and dynamics |
D | 28 | 0.6 | Cell cycle control, Cell division, chromosome partitioning |
V | 45 | 1.0 | Defense mechanisms |
T | 162 | 3.5 | Signal transduction mechanisms |
M | 237 | 5.1 | Cell wall/membrane biogenesis |
N | 119 | 2.5 | Cell motility |
U | 61 | 1.3 | Intracellular trafficking and secretion |
O | 154 | 3.3 | Posttranslational modification, protein turnover, chaperones |
C | 226 | 4.8 | Energy production and conversion |
G | 165 | 3.5 | Carbohydrate transport and metabolism |
E | 342 | 7.3 | Amino acid transport and metabolism |
F | 75 | 1.6 | Nucleotide transport and metabolism |
H | 154 | 3.3 | Coenzyme transport and metabolism |
I | 177 | 3.8 | Lipid transport and metabolism |
P | 176 | 3.8 | Inorganic ion transport and metabolism |
Q | 73 | 1.6 | Secondary metabolites biosynthesis, transport and catabolism |
R | 352 | 7.5 | General function prediction only |
S | 362 | 7.7 | Function unknown |
- | 1097 | 23.4 | Not in COGs |