From: Genome sequence of Shinella sp. strain DD12, isolated from homogenized guts of starved Daphnia magna
Attribute | Value | % of total |
---|---|---|
Genome size (bp) | 7,677,812 | 100.00 |
DNA coding (bp) | 6,843,125 | 89.13 |
DNA G + C (bp) | 4,867,601 | 63.40 |
DNA scaffolds | 235 | 100.00 |
Total genes | 7555 | 100.00 |
Protein coding genes | 7505 | 99.34 |
RNA genes | 50 | 0.66 |
Pseudo genes | 164 | 2.17 |
Genes in internal clusters | 6245 | 82.66 |
Genes with function prediction | 6241 | 82.64 |
Genes assigned to COGs | 5394 | 71.40 |
Genes with Pfam domains | 6268 | 82.96 |
Genes with signal peptides | 681 | 9.01 |
Genes with transmembrane helices | 1725 | 22.83 |
CRISPR repeats | 0 | 0 |