Genome sequence of Shinella sp. strain DD12, isolated from homogenized guts of starved Daphnia magna

Table 1 Classification and general features of Shinella sp. strain DD12

MIGS ID	Property	Term	Evidence code^a
	Classification	Domain Bacteria	TAS [47]
		Phylum Proteobacteria	TAS [48]
		Class Alphaproteobacteria	TAS [49]
		Order Rhizobiales	TAS [21, 50]
		Family Rhizobiaceae	TAS [21, 51, 52]
		Genus Shinella	TAS [20, 53]
		Species Shinella sp.	TAS [20]
		Strain: DD12	TAS
	Gram stain	negative	TAS [20]
	Cell shape	Rod	IDA
	Motility	Motile	IDA
	Sporulation	Non-sporulating	NAS
	Temperature range	15–28 °C	IDA
	Optimum temperature	25 °C	IDA
	pH range; Optimum	6.6–7.5;7.0	IDA
	Carbon source	Glucose, Varied	TAS [20]
MIGS-6	Habitat	Daphnia magna gut	IDA
MIGS-6.3	Salinity	0.5–5 % NaCl	IDA
MIGS-22	Oxygen requirement	Aerobic	TAS [20]
MIGS-15	Biotic relationship	free-living/host/commensal	IDA
MIGS-14	Pathogenicity	non-pathogen	NAS
MIGS-4	Geographic location	Germany/Constance	IDA
MIGS-5	Sample collection	November 2008	IDA
MIGS-4.1	Latitude	47.689081	IDA
MIGS-4.2	Longitude	9.187099	IDA
MIGS-4.4	Altitude	405 m; a.s.l.	IDA

^aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [54]

ISSN: 2524-6372