Skip to main content

Table 4 Number of genes associated with general COG functional categories

From: Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland

Code

Value

%age

Description

J

176

13.78

Translation, ribosomal structure and biogenesis

A

1

0.08

RNA processing and modification

K

41

3.13

Transcription

L

40

3.6

Replication, recombination and repair

B

1

0.08

Chromatin structure and dynamics

D

7

0.47

Cell cycle control, cell division, and chromosome partitioning

V

18

0.55

Defense mechanisms

T

16

0.78

Signal transduction mechanisms

M

30

1.96

Cell wall/membrane biogenesis

N

4

0.31

Cell motility

U

9

0.78

Intracellular trafficking and secretion

O

43

3.21

Posttranslational modification, protein turnover, chaperones

C

76

6.03

Energy production and conversion

G

44

3.13

Carbohydrate transport and metabolism

E

62

4.86

Amino acid transport and metabolism

F

40

2.74

Nucleotide transport and metabolism

H

59

3.29

Coenzyme transport and metabolism

I

17

0.86

Lipid transport and metabolism

P

66

5.32

Inorganic ion transport and metabolism

Q

2

0.23

Secondary metabolites biosynthesis, transport and catabolism

R

102

10.73

General function prediction only

S

47

6.81

Function unknown

-

488

38.21

Not in COGs

  1. The total is based on the total number of protein coding genes in the annotated genome