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Fig. 1 | Standards in Genomic Sciences

Fig. 1

From: Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland

Fig. 1

A 16S ribosomal DNA sequence-based phylogenetic tree showing the position of Desulfurococcus mobilis DSM 2161 (shown in bold) relative to other Desulfurococcus species and other organisms from Sulfolobales and Thermoproteales orders. Alignment and trimming of genes encoding 16S rRNA (aligned size of 1112 bp) were performed by the use of Muscle 3.8.31 [33] and Gblocks 0.91, respectively. The tree was constructed using Maximum Likelihood method, dnaml, in the Phylip-3.696 package [34] and viewed by the use of FigTree (http://tree.bio.ed.ac.uk/), as previously described [35]. Type strains are indicated with the superscript T. NCBI accession numbers for genome sequence are presented within parenthesis. Methanocaldococcus jannaschii, a euryarchaeon (not shown), was used as an outgroup [36]. Number in each branch shows a percentage of bootstrap value from 100 replicates. The bar indicates 0.02 substitutions per nucleotide position

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