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Table 4 Genome statistics

From: Complete genome sequence and characterization of avian pathogenic Escherichia coli field isolate ACN001

Attribute Value % of Totala
Genome size (bp) 5,276,962 100.00
DNA coding (bp) 4,614,690 87.45
DNA G + C (bp) 2,669,115 50.56
Total genes 5,253 100.00
Protein coding genes 4,794 91.26
RNA genes 108 2.06
tRNA genes 86 1.64
rRNA genes 22 0.42
Pseudo genes 51 0.97
Genes with function prediction 3,630 69.11
Genes assigned to COGs 3,203 60.97
Genes with Pfam domains 4,463 84.96
Genes with signal peptides 424 8.07
Genes with transmembrane helices 1,124 21.40
CRISPR repeats 2  
  1. aTotal based on either the size of the genome in base pairs (bp) or the total number of genes in the annotated genome