Table 4 Number of genes associated with general COG functional categories
From: Complete genome sequence of Methanospirillum hungatei type strain JF1
Code | Value | % age | Description |
|---|---|---|---|
J | 180 | 8.65 | Translation, ribosomal structure and biogenesis |
A | Â | 0.00 | RNA processing and modification |
K | 84 | 4.03 | Transcription |
L | 82 | 3.94 | Replication, recombination and repair |
B | 8 | 0.38 | Chromatin structure and dynamics |
D | 16 | 0.77 | Cell cycle control, Cell division, chromosome partitioning |
V | 53 | 2.55 | Defense mechanisms |
T | 154 | 7.4 | Signal transduction mechanisms |
M | 85 | 4.08 | Cell wall/membrane biogenesis |
N | 54 | 2.59 | Cell motility |
U | 17 | 0.82 | Intracellular trafficking and secretion |
O | 89 | 4.27 | Posttranslational modification, protein turnover, chaperones |
C | 186 | 8.93 | Energy production and conversion |
G | 59 | 2.83 | Carbohydrate transport and metabolism |
E | 165 | 7.93 | Amino acid transport and metabolism |
F | 62 | 2.98 | Nucleotide transport and metabolism |
H | 162 | 7.78 | Coenzyme transport and metabolism |
I | 31 | 1.49 | Lipid transport and metabolism |
P | 147 | 7.06 | Inorganic ion transport and metabolism |
Q | 16 | 0.77 | Secondary metabolites biosynthesis, transport and catabolism |
R | 217 | 10.42 | General function prediction only |
S | 160 | 7.68 | Function unknown |
- | 1435 | 43.39 | Not in COGs |