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Fig. 3 | Standards in Genomic Sciences

Fig. 3

From: Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270

Fig. 3

Graphical map of the P. fluorescens strain UM270. Numbers represent Megabases (Mb). From outside to the center: Genes on forward strand (blue), Genes on reverse strand (red), RNA genes (rRNAs black color, tRNAs red color) G + C% (green and gray), G + C skew (purple and yellow). To display the P. fluorescens strain UM270 draft genome we ran a blastn comparison using the contigs as query, against the genome sequence of P. fluorescens strain Pf0-1 as target reference. We then used these results to order the contigs following the matching coordinates of the reference genome. Contigs not matching the reference genome were ordered from largest to smallest and appended to the contigs matching the genome of reference. The ordered contigs were joined with 50 bp of “N” to draw this figure using the DNA plotter software

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