Table 4 Number of genes associated with general COG functional categories
From: Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp. ARP1
Code | Value | % age | Description |
|---|---|---|---|
J | 143 | 3.17 | Translation, ribosomal structure, and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 183 | 4.06 | Transcription |
L | 85 | 1.89 | Replication, recombination, and repair |
B | 1 | 0.02 | Chromatin structure and dynamics |
D | 0 | 0.00 | Cell cycle control, Cell division, chromosome partitioning |
V | 31 | 0.69 | Defense mechanisms |
T | 74 | 1.64 | Signal transduction mechanisms |
M | 102 | 2.26 | Cell wall/membrane biogenesis |
N | 11 | 0.24 | Cell motility |
U | 18 | 0.40 | Intracellular trafficking and secretion |
O | 79 | 1.75 | Posttranslational modification, protein turnover, chaperones |
C | 184 | 4.08 | Energy production and conversion |
G | 125 | 2.77 | Carbohydrate transport and metabolism |
E | 226 | 5.01 | Amino acid transport and metabolism |
F | 66 | 1.46 | Nucleotide transport and metabolism |
H | 118 | 2.62 | Coenzyme transport and metabolism |
I | 194 | 4.30 | Lipid transport and metabolism |
P | 154 | 3.42 | Inorganic ion transport and metabolism |
Q | 141 | 3.13 | Secondary metabolites biosynthesis, transport and catabolism |
R | 346 | 7.67 | General function prediction only |
S | 184 | 4.08 | Function unknown |
- | 2231 | 49.48 | Not in COGs |