Table 3 Genome statistics
From: Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp. ARP1
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 4,745,080 | 100.00 |
DNA coding (bp) | 4,347,123 | 91.61 |
DNA G+C (bp) | 3,256,678 | 68.63 |
DNA scaffolds | 50 | |
Total genes | 4509 | 100.00 |
Protein coding genes | 4438 | 98.42 |
RNA genes | 71 | 1.57 |
tRNA genes | 45 | 1.00 |
rRNA genes | 5 | 0.01 |
rRNA operons | 1a | |
Pseudo genes | 0 | 0.00 |
Genes in internal clusters | NA | |
Genes with function prediction | 3505 | 77.73 |
Genes assigned to COGs | 2207 | 48.95 |
Genes with Pfam domains | 1330 | 29.50 |
Genes with TIGRFAM domains | 793 | 17.59 |
Genes with signal peptides | 334 | 7.41 |
Genes with transmembrane helices | 1140 | 25.28 |
CRISPR repeats | 2 | 0.04 |