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Table 4 Number of genes associated with the 25 general COG functional categories

From: Genome sequence of a dissimilatory Fe(III)-reducing bacterium Geobacter soli type strain GSS01T

Code Value % of totala Description
J 145 4.58 Translation
A - - RNA processing and modification
K 73 2.31 Transcription
L 83 2.62 Replication, recombination and repair
B 1 0.03 Chromatin structure and dynamics
D 17 0.54 Cell cycle control, mitosis and meiosis
Y - - Nuclear structure
V 36 1.14 Defense mechanisms
T 141 4.45 Signal transduction mechanisms
M 97 3.06 Cell wall/membrane biogenesis
N 65 2.05 Cell motility
Z - - Cytoskeleton
W - - Extracellular structures
U 45 1.42 Intracellular trafficking and secretion
O 80 2.53 Posttranslational modification, protein turnover, chaperones
C 153 4.83 Energy production and conversion
G 66 2.08 Carbohydrate transport and metabolism
E 162 5.12 Amino acid transport and metabolism
F 46 1.45 Nucleotide transport and metabolism
H 98 3.10 Coenzyme transport and metabolism
I 52 1.64 Lipid transport and metabolism
P 82 2.59 Inorganic ion transport and metabolism
Q 28 0.88 Secondary metabolites biosynthesis, transport and catabolism
R 157 4.96 General function prediction only
S 100 3.16 Function unknown
- 1439 45.45 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the annotated genome