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Table 4 Number of genes associated with the 25 general COG functional categories

From: Genome sequence of a dissimilatory Fe(III)-reducing bacterium Geobacter soli type strain GSS01T

Code

Value

% of totala

Description

J

145

4.58

Translation

A

-

-

RNA processing and modification

K

73

2.31

Transcription

L

83

2.62

Replication, recombination and repair

B

1

0.03

Chromatin structure and dynamics

D

17

0.54

Cell cycle control, mitosis and meiosis

Y

-

-

Nuclear structure

V

36

1.14

Defense mechanisms

T

141

4.45

Signal transduction mechanisms

M

97

3.06

Cell wall/membrane biogenesis

N

65

2.05

Cell motility

Z

-

-

Cytoskeleton

W

-

-

Extracellular structures

U

45

1.42

Intracellular trafficking and secretion

O

80

2.53

Posttranslational modification, protein turnover, chaperones

C

153

4.83

Energy production and conversion

G

66

2.08

Carbohydrate transport and metabolism

E

162

5.12

Amino acid transport and metabolism

F

46

1.45

Nucleotide transport and metabolism

H

98

3.10

Coenzyme transport and metabolism

I

52

1.64

Lipid transport and metabolism

P

82

2.59

Inorganic ion transport and metabolism

Q

28

0.88

Secondary metabolites biosynthesis, transport and catabolism

R

157

4.96

General function prediction only

S

100

3.16

Function unknown

-

1439

45.45

Not in COGs

  1. aThe total is based on the total number of protein coding genes in the annotated genome