Table 3 Genome statistics of G. soli strain GSS01T
From: Genome sequence of a dissimilatory Fe(III)-reducing bacterium Geobacter soli type strain GSS01T
Attribute | Genome (total) | |
|---|---|---|
Value | % of totala | |
Genome size (bp) | 3,657,100 | 100.00 |
DNA coding (bp) | 3,293,088 | 90.04 |
DNA G + C (bp) | 2,258,691 | 61.76 |
DNA scaffolds | 8 | |
Total genes | 3312 | 100.00 |
Protein coding genes | 3229 | 97.49 |
RNA genes | 54 | 1.63 |
Pseudo genes | 28 | 0.84 |
Genes in internal clusters | 79 | 2.39 |
Genes with function prediction | 2626 | 79.29 |
Genes assigned to COGs | 1727 | 52.14 |
Genes with Pfam domains | 2693 | 81.31 |
Genes with signal peptides | 257 | 7.76 |
Genes with transmembrane helices (≥3) | 303 | 9.15 |
CRISPR repeats | 1 | |