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Table 3 Genome statistics of G. soli strain GSS01T

From: Genome sequence of a dissimilatory Fe(III)-reducing bacterium Geobacter soli type strain GSS01T

Attribute Genome (total)
Value % of totala
Genome size (bp) 3,657,100 100.00
DNA coding (bp) 3,293,088 90.04
DNA G + C (bp) 2,258,691 61.76
DNA scaffolds 8  
Total genes 3312 100.00
Protein coding genes 3229 97.49
RNA genes 54 1.63
Pseudo genes 28 0.84
Genes in internal clusters 79 2.39
Genes with function prediction 2626 79.29
Genes assigned to COGs 1727 52.14
Genes with Pfam domains 2693 81.31
Genes with signal peptides 257 7.76
Genes with transmembrane helices (≥3) 303 9.15
CRISPR repeats 1  
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome