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Table 1 Classification and general features of G. soli GSS01T according to the MIGS recommendations [36]

From: Genome sequence of a dissimilatory Fe(III)-reducing bacterium Geobacter soli type strain GSS01T

MIGS Id

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [37]

Phylum Proteobacteria

TAS [38]

Class Deltaproteobacteria

TAS [39, 40]

Order Desulfuromonadales

TAS [39, 41]

Family Geobacteraceae

TAS [39, 42, 43]

Genus Geobacter

TAS [1, 44]

Species Geobacter soli

TAS [3]

Type strain GSS01=KCTC 4545=MCCC 1 K00269

TAS [3]

 

Gram stain

Negative

TAS [3]

 

Cell shape

Rod

TAS [3]

 

Motility

Motile

TAS [3]

 

Sporulation

Nonsporulating

TAS [3]

 

Temperature range

16–40 °C

TAS [3]

 

Optimum temperature

30 °C

TAS [3]

 

pH range; Optimum

6–8.5; 7.0

NAS

 

Carbon source

Acetate, ethanol, glucose, lactate, butyrate, pyruvate, benzoate, benzaldehyde, m-cresol and phenol

TAS [3]

 

Terminal electron acceptor

Ferrihydrite, Fe(III) citrate, Mn(IV), sulfur, and AQDS

TAS [3]

MIGS-6

Habitat

Forest soil

TAS [3]

MIGS-6.3

Salinity

0–1.5 % NaCl (w/v)

NAS

MIGS-22

Oxygen requirement

Obligately anaerobic

TAS [3]

MIGS-15

Biotic relationship

Free living

NAS

MIGS-14

Pathogenicity

None known

 

MIGS-4

Geographic location

Longfu Town, Sihui City, Guangdong Province, China

TAS [3]

MIGS-5

Sample collection

Mar 14, 2013

NAS

MIGS-4.1

Latitude

23.37o N

TAS [3]

MIGS-4.2

Longitude

112.70° E

TAS [3]

MIGS-4.4

Altitude

11 m

NAS

  1. a Evidence code-IDA Inferred from direct assay, TAS Traceable author statement (i.e., a direct report exists in the literature), NAS Non-traceable author statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology Project [45]