From: Genome sequences of two closely related strains of Escherichia coli K-12 GM4792
Attribute | Valueb | % of Totala,b | Valuec | % of Totala,c |
---|---|---|---|---|
Genome size (bp) | 4,622,342 | 100.00 | 4,621,656 | 100.00 |
DNA coding (bp) | 3,888,159 | 84.12 | 3,873,721 | 83.82 |
DNA G + C (bp) | 2,348,605 | 50.81 | 2,348,022 | 50.80 |
DNA scaffolds | 1 | Â | 1 | 0.00 |
Total genes | 4,144 | 100.00 | 4,117 | 100.00 |
Protein coding genes | 4,061 | 98.00 | 4,043 | 98.20 |
RNA genes | 83 | 2.00 | 74 | 1.80 |
Pseudo genes | 0 | 0.00 | 0 | 0.00 |
Genes in internal clusters | 2,036 | 49.13 | 2,027 | 49.23 |
Genes with function prediction | 3,922 | 94.64 | 3,900 | 94.73 |
Genes assigned to COGs | 3,592 | 88.45 | 3,580 | 88.55 |
Genes with Pfam domains | 3,838 | 92.62 | 3,818 | 92.74 |
Genes with signal peptides | 410 | 9.89 | 408 | 9.91 |
Genes with transmembrane helices | 1,058 | 25.53 | 1,048 | 25.46 |
CRISPR repeats | 2 | Â | 2 | Â |