Table 3 Genome statistics
From: Complete genome sequence and characterization of the haloacid–degrading Burkholderia caribensis MBA4
Attribute | Value | % of Totala |
|---|---|---|
Genome size (bp) | 9,482,704 | 100.00 |
DNA coding (bp) | 8,209,808 | 86.58 |
DNA G + C (bp) | 5,922,869 | 62.46 |
DNA scaffolds | 3 | 100.00 |
Total genes | 9151 | 100.00 |
Protein coding genes | 9056 | 98.96 |
RNA genes | 80 | 0.87 |
Pseudo genes | 15 | 0.16 |
Genes in internal clusters | Not determined | Not determined |
Genes with function prediction | 7327 | 80.07 |
Genes assigned to COGs | 6596 | 72.84 |
Genes with Pfam domains | 6737 | 74.39 |
Genes with signal peptides | 824 | 9.10 |
Genes with transmembrane helices | 2008 | 22.17 |
CRISPR repeats | 10 |