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Table 4 Number of genes associated with general COG functional categories

From: Complete genome of Pseudomonas chlororaphis strain UFB2, a soil bacterium with antibacterial activity against bacterial canker pathogen of tomato

Code Value % age Description
J 231 4.89 Translation, ribosomal structure and biogenesis
A 1 0.02 RNA processing and modification
K 418 8.85 Transcription
L 123 2.60 Replication, recombination and repair
B 3 0.06 Chromatin structure and dynamics
D 39 0.83 Cell cycle control, Cell division, chromosome partitioning
V 101 2.14 Defense mechanisms
T 316 6.69 Signal transduction mechanisms
M 262 5.55 Cell wall/membrane biogenesis
N 166 3.52 Cell motility
W 44 0.93 Extracellular structures
U 137 2.90 Intracellular trafficking and secretion
O 166 3.52 Posttranslational modification, protein turnover, chaperones
C 304 6.44 Energy production and conversion
G 227 4.81 Carbohydrate transport and metabolism
E 483 10.23 Amino acid transport and metabolism
F 92 1.95 Nucleotide transport and metabolism
H 242 5.12 Coenzyme transport and metabolism
I 234 4.96 Lipid transport and metabolism
P 257 5.44 Inorganic ion transport and metabolism
Q 142 3.01 Secondary metabolites biosynthesis, transport and catabolism
R 430 9.11 General function prediction only
S 260 5.51 Function unknown
- 1464 26.35 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome