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Table 3 Genome statistics

From: Complete genome of Pseudomonas chlororaphis strain UFB2, a soil bacterium with antibacterial activity against bacterial canker pathogen of tomato

Attribute Value % of Total
Genome size (bp) 6,360,256 100.00
DNA coding (bp) 5,588,126 87.86
DNA Gā€‰+ā€‰C (bp) 3,945,558 62.03
DNA scaffolds 1 100.00
Total genes 5,556 100.00
Protein coding genes 5,473 98.51
RNA genes 83 1.49
Pseudo genes 90 1.62
Genes in internal clusters 5,473 98.51
Genes with function prediction 4,886 87.94
Genes assigned to COGs 4,092 73.65
Genes with Pfam domains 4,748 85.46
Genes with signal peptides 577 10.39
Genes with transmembrane helices 1,228 22.10
CRISPR repeats 0 0