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Table 3 Genome statistics

From: Complete genome sequence of and proposal of Thermofilum uzonense sp. nov. a novel hyperthermophilic crenarchaeon and emended description of the genus Thermofilum

Attribute Number of genes % of Total genesa
Genome size (bp) 1,611,988 100.00
DNA codingb (bp) 1,270,203 78.8
DNA G+C (bp) 772,789 47.9
DNA scaffolds 1 100.00
Total genes 1697 100.00
Protein coding genes 1455 85.7
RNA genes 50 3.0
Pseudo genes 192 11.3
Genes in internal clusters NDc NDc
Genes with function prediction 1334 78.6
Genes assigned to COGs 1389 81.9
Genes with Pfam domains 1066 62.8
Genes with signal peptides 343 20.2
Genes with transmembrane helices 129 7.6
CRISPR repeats 2
  1. a) The total is based on either the size of the genome in base pairs or the total number of genes in the annotated genome
  2. b) Corresponding to functional CDS. Pseudogenes are not included in this calculation
  3. c) ND not determined