Table 4 Number of genes associated with general functional COG categories
Code | Value | % age | Description |
|---|---|---|---|
J | 183 | 3.41 | Translation, ribosomal structure and biogenesis |
A | 3 | 0.06 | RNA processing and modification |
K | 474 | 8.84 | Transcription |
L | 148 | 2.76 | Replication, recombination and repair |
B | 3 | 0.06 | Chromatin structure and dynamics |
D | 39 | 0.73 | Cell cycle control, Cell division, chromosome partitioning |
V | 82 | 1.53 | Defense mechanisms |
T | 483 | 9.01 | Signal transduction mechanisms |
M | 272 | 5.07 | Cell wall/membrane biogenesis |
N | 190 | 3.54 | Cell motility |
U | 178 | 3.32 | Intracellular trafficking and secretion |
O | 181 | 3.38 | Posttranslational modification, protein turnover, chaperones |
C | 273 | 5.09 | Energy production and conversion |
G | 302 | 5.63 | Carbohydrate transport and metabolism |
E | 374 | 6.98 | Amino acid transport and metabolism |
F | 85 | 1.59 | Nucleotide transport and metabolism |
H | 179 | 3.34 | Coenzyme transport and metabolism |
I | 172 | 3.21 | Lipid transport and metabolism |
P | 291 | 5.43 | Inorganic ion transport and metabolism |
Q | 98 | 1.83 | Secondary metabolite biosynthesis, transport and catabolism |
R | 534 | 9.96 | General function prediction only |
S | 441 | 8.22 | Function unknown |
- | 1,181 | 22.03 | Not in COGs |