Table 4 Number of genes associated with the general COG functional categories
Code | Value | % of totala | Description |
|---|---|---|---|
J | 137 | 5.01 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03 | RNA processing and modification |
K | 103 | 3.23 | Transcription |
L | 77 | 2.41 | Replication, recombination and repair |
B | 2 | 0.06 | Chromatin structure and dynamics |
D | 27 | 0.85 | Cell cycle control, cell division, chromosome partitioning |
V | 65 | 2.04 | Defense mechanisms |
T | 101 | 3.17 | Signal transduction mechanisms |
M | 191 | 5.99 | Cell wall/membrane/envelope biogenesis |
N | 67 | 2.10 | Cell motility |
U | 32 | 1.00 | Intracellular trafficking and secretion |
O | 123 | 3.85 | Posttranslational modification, protein turnover, chaperones |
C | 127 | 3.98 | Energy production and conversion |
G | 171 | 5.36 | Carbohydrate transport and metabolism |
E | 202 | 6.33 | Amino acid transport and metabolism |
F | 65 | 2.04 | Nucleotide transport and metabolism |
H | 126 | 3.95 | Coenzyme transport and metabolism |
I | 105 | 3.29 | Lipid transport and metabolism |
P | 105 | 3.29 | Inorganic ion transport and metabolism |
Q | 64 | 2.01 | Secondary metabolites biosynthesis, transport and catabolism |
R | 218 | 6.83 | General function prediction only |
S | 85 | 2.66 | Function unknown |
- | 1,223 | 38.33 | Not in COGs |