Table 4 Number of genes associated with the 25 general COG functional categories
Code | Value | % of totala | Description |
|---|---|---|---|
J | 145 | 5.26 | Translation |
A | 0 | 0.00 | RNA processing and modification |
K | 120 | 4.36 | Transcription |
L | 148 | 5.37 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 24 | 0.87 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 45 | 1.63 | Defense mechanisms |
T | 35 | 1.27 | Signal transduction mechanisms |
M | 90 | 3.27 | Cell wall/membrane biogenesis |
N | 1 | 0.04 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 20 | 0.73 | Intracellular trafficking and secretion |
O | 61 | 2.21 | Posttranslational modification, protein turnover, chaperones |
C | 91 | 3.30 | Energy production and conversion |
G | 106 | 3.85 | Carbohydrate transport and metabolism |
E | 174 | 6.32 | Amino acid transport and metabolism |
F | 64 | 2.32 | Nucleotide transport and metabolism |
H | 77 | 2.80 | Coenzyme transport and metabolism |
I | 50 | 1.82 | Lipid transport and metabolism |
P | 124 | 4.50 | Inorganic ion transport and metabolism |
Q | 23 | 0.84 | Secondary metabolites biosynthesis, transport and catabolism |
R | 228 | 8.28 | General function prediction only |
S | 220 | 7.99 | Function unknown |
– | 208 | 7.55 | Other COG categories |
– | 701 | 25.44 | Not in COGs |