Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,756,729 | 100 |
DNA coding (bp) | 3,305,445 | 87.99 |
DNA G + C (bp) | 2,500,004 | 66.55 |
Total genes | 3,557 | 100 |
Protein coding genes | 3,500 | 98.40 |
RNA genes | 57 | 1.60 |
Pseudo genes | 124 | 3.49 |
Genes in internal clusters | 176 | 3.46 |
Genes with function prediction | 2,739 | 77.00 |
Genes assigned to COGs | 2,317 | 65.14 |
Genes with Pfam domains | 2,835 | 79.70 |
Genes with signal peptides | 271 | 7.62 |
Genes with transmembrane helices | 841 | 23.64 |
CRISPR repeats | 8 | 100 |