Table 4 Number of genes associated with general COG functional categories
Code | Value | % of total | Description |
|---|---|---|---|
J | 132 | 8.75 | Translation |
A | 0 | 0.00 | RNA processing and modification |
K | 100 | 6.63 | Transcription |
L | 92 | 6.10 | Replication, recombination and repair |
B | 2 | 0.13 | Chromatin structure and dynamics |
D | 14 | 0.93 | Cell cycle control, mitosis and meiosis |
V | 18 | 1.19 | Defense mechanisms |
T | 56 | 3.71 | Signal transduction mechanisms |
M | 34 | 2.25 | Cell wall/membrane biogenesis |
N | 10 | 0.66 | Cell motility |
U | 28 | 1.86 | Intracellular trafficking and secretion |
O | 54 | 3.58 | Posttranslational modification, protein turnover, chaperones |
C | 136 | 9.01 | Energy production and conversion |
G | 41 | 2.72 | Carbohydrate transport and metabolism |
E | 118 | 7.82 | Amino acid transport and metabolism |
F | 49 | 3.25 | Nucleotide transport and metabolism |
H | 70 | 4.64 | Coenzyme transport and metabolism |
I | 28 | 1.86 | Lipid transport and metabolism |
P | 57 | 3.78 | Inorganic ion transport and metabolism |
Q | 10 | 0.66 | Secondary metabolites biosynthesis, transport and catabolism |
R | 131 | 8.68 | General function prediction only |
S | 98 | 6.49 | Function unknown |
– | 359 | 23.79 | Not in COGs |