Table 3 Genome statistics
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 1,473,548 | 100.00 |
DNA coding (bp) | 1,323,945 | 89.85 |
DNA G+C (bp) | 691,289 | 46.91 |
DNA scaffolds | 1 | Â |
Total genes | 1,559 | 100.00 |
Protein coding genes | 1,509 | 96.79 |
RNA genes | 50 | 3.21 |
Pseudo genes | 2 | 0.13 |
Genes in internal clusters | 311 | 19.95 |
Genes with function prediction | 1,006 | 64.53 |
Genes assigned to COGs | 1,150 | 73.77 |
Genes with Pfam domains | 1,224 | 78.51 |
Genes with signal peptides | 129 | 8.27 |
Genes with transmembrane helices | 345 | 22.13 |
CRISPR repeats | 1 | Â |