Table 3 Genome statistics
From: High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,964,649 | 100.00 |
DNA coding (bp) | 4,306,583 | 86.74 |
DNA G + C (bp) | 2,768,589 | 55.77 |
DNA scaffolds | 23 | 100.00 |
Total genes | 4,699 | 100.00 |
Protein coding genes | 4,556 | 96.96 |
RNA genes | 143 | 3.04 |
Pseudo genes | 135 | 2.87 |
Genes in internal clusters | NA | Â |
Genes with function prediction | 3,921 | 83.44 |
Genes assigned to COGs | 3,507 | 74.63 |
Genes with Pfam domains | 4,059 | 86.38 |
Genes with signal peptides | 425 | 9.04 |
Genes with transmembrane helices | 1,075 | 22.88 |
CRISPR repeats | 1 | - |