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Table 1 Classification and general features of G. tropica DSM 19535T [38, 39]

From: High-quality draft genome sequence of Gracilimonas tropica CL-CB462T (DSM 19535T), isolated from a Synechococcus culture

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [40]

Phylum Bacteriodetes

TAS [4]

Class Sphingobacteriia

TAS [41]

Order Sphingobacteriales

TAS [41]

Genus Gracilimonas

TAS [1]

Species Gracilimonas tropica

TAS [1]

Type strain CL-CB462T

TAS [1]

 

Gram stain

Negative

TAS [1]

 

Cell shape

Rod-shaped

TAS [1]

 

Motility

Non-motile

TAS [1]

 

Sporulation

Non-sporulation

IDA

 

Temperature range

20–40 °C

TAS [1]

 

Optimum temperature

35 °C

TAS [1]

 

Energy source

Heterotroph

TAS [1]

 

Auxotroph for

L-isoleucine, L-methionine

IDA

 

Carbon source

Glucose, fructose, aspartate

TAS [1]

MIGS-6

Habitat

Marine, aquatic

TAS [1]

MIGS-6.2

pH

6–10

TAS [1]

MIGS-6.3

Salinity

1–20 % (optimum: 3–6 %)

TAS [1]

MIGS-22

Oxygen requirement

Facultative

TAS [1]

MIGS-15

Biotic relationship

Free living

TAS [1]

MIGS-14

Pathogenicity

Unknown

NAS

MIGS-4

Geographic location

Tropical NW Pacific

TAS [1]

MIGS-5

Sample collection

2009

TAS [1]

MIGS-4.1

Latitude

Unknown

NAS

MIGS-4.2

Longitude

Unknown

NAS

MIGS-4.4

Altitude

0 m

NAS

  1. a Evidence codes - IDA Inferred from Direct Assay, TAS Traceable Author Statement (i.e., a direct report exists in the literature), NAS Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [42]