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Table 4 Number of genes associated with general COG functional categories

From: Genome sequence of Pedobacter glucosidilyticus DD6b, isolated from zooplankton Daphnia magna

Code Value % age Description
J 149 7.17 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 129 6.20 Transcription
L 102 4.91 Replication, recombination and repair
B 1 0.04 Chromatin structure and dynamics
D 20 0.96 Cell cycle control, Cell division, chromosome partitioning
V 35 1.68 Defense mechanisms
T 69 3.32 Signal transduction mechanisms
M 185 8.90 Cell wall/membrane biogenesis
N 4 0.19 Cell motility
U 27 1.30 Intracellular trafficking and secretion
O 76 3.66 Posttranslational modification, protein turnover, chaperones
C 123 5.92 Energy production and conversion
G 173 8.32 Carbohydrate transport and metabolism
E 154 7.41 Amino acid transport and metabolism
F 64 3.08 Nucleotide transport and metabolism
H 117 5.63 Coenzyme transport and metabolism
I 77 3.70 Lipid transport and metabolism
P 119 7.72 Inorganic ion transport and metabolism
Q 36 1.73 Secondary metabolites biosynthesis, transport and catabolism
R 255 12.27 General function prediction only
S 164 7.89 Function unknown
- 1442 43.02 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome