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Table 3 Genome statistics

From: Genome sequence of Pedobacter glucosidilyticus DD6b, isolated from zooplankton Daphnia magna

Attribute Value % of Total
Genome size (bp) 3,872,381 100.00
DNA coding (bp) 3,510,386 90.65
DNA G + C (bp) 1,344,522 34.72
DNA scaffolds 93 100.00
Total genes 3352 100.00
Protein coding genes 3311 98.78
RNA genes 41 1.22
Pseudo genes 0 0
Genes in internal clusters 2465 73.54
Genes with function prediction 2610 77.86
Genes assigned to COGs 1910 73.54
Genes with Pfam domains 2646 56.98
Genes with signal peptides 482 14.38
Genes with transmembrane helices 749 22.34
CRISPR repeats 1 0