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Table 3 Genome statistics

From: Genome sequence of Pedobacter glucosidilyticus DD6b, isolated from zooplankton Daphnia magna

Attribute

Value

% of Total

Genome size (bp)

3,872,381

100.00

DNA coding (bp)

3,510,386

90.65

DNA G + C (bp)

1,344,522

34.72

DNA scaffolds

93

100.00

Total genes

3352

100.00

Protein coding genes

3311

98.78

RNA genes

41

1.22

Pseudo genes

0

0

Genes in internal clusters

2465

73.54

Genes with function prediction

2610

77.86

Genes assigned to COGs

1910

73.54

Genes with Pfam domains

2646

56.98

Genes with signal peptides

482

14.38

Genes with transmembrane helices

749

22.34

CRISPR repeats

1

0