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Table 1 Classification and general features of P. glucosidilyticus strain DD6b [22]

From: Genome sequence of Pedobacter glucosidilyticus DD6b, isolated from zooplankton Daphnia magna

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [39]

  

Phylum

TAS [40]

  

Class Sphingobacteriia

TAS [41]

  

Order Sphingobacteriales

TAS [42]

  

Family Sphingobacteriaceae

TAS [43]

  

Genus Pedobacter

TAS [43, 44]

  

Species Pedobacter glucosidilyticus

TAS [17]

  

strain: DD6b

 
 

Gram stain

negative

TAS [17]

 

Cell shape

Rods

IDA,TAS [17]

 

Motility

Gliding, non-flagelated

IDA

 

Sporulation

Non-sporulating

TAS [17]

 

Temperature range

15–28 °C

IDA

 

Optimum temperature

25 °C

IDA

 

pH range; Optimum

6.5–7.5; 7.0

IDA

 

Carbon source

glucose

IDA

MIGS-6

Habitat

gut of D. magna

TAS [1]

MIGS-6.3

Salinity

0.2–0.5 % NaCl (w/v)

IDA

MIGS-22

Oxygen requirement

Aerobic

IDA

MIGS-15

Biotic relationship

commensal

TAS [1]

MIGS-14

Pathogenicity

non-pathogen

NAS

MIGS-4

Geographic location

Germany/Constance

TAS [1]

MIGS-5

Sample collection

October 2008

NAS

MIGS-4.1

Latitude

47.689081

NAS

MIGS-4.2

Longitude

9.187099

NAS

MIGS-4.4

Altitude

405 m a.s.l.

NAS

  1. aEvidence codes - IDA Inferred from Direct Assay, TAS Traceable Author Statement (i.e., a direct report exists in the literature), NAS Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [45]