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Table 4 Number of protein-coding genes associated with the 25 general COG functional categories in the P. yanchengensis Y32T genome

From: High quality draft genome sequence of the moderately halophilic bacterium Pontibacillus yanchengensis Y32T and comparison among Pontibacillus genomes

COG class

Count

% agea

COG description

J

171

4.31

Translation, ribosomal structure and biogenesis

A

0

0.00

RNA processing and modification

K

258

6.51

Transcription

L

148

3.73

Replication, recombination and repair

B

2

0.05

Chromatin structure and dynamics

D

36

0.91

Cell cycle control, cell division, chromosome partitioning

Y

0

0.00

Nuclear structure

V

54

1.36

Defense mechanisms

T

222

5.60

Signal transduction mechanisms

M

173

4.36

Cell wall/membrane/envelope biogenesis

N

71

1.79

Cell motility

Z

0

0.00

Cytoskeleton

W

0

0.00

Extracellular structures

U

58

1.46

Intracellular trafficking, secretion, and vesicular transport

O

119

3.00

Posttranslational modification, protein turnover, chaperones

C

199

5.02

Energy production and conversion

G

253

6.38

Carbohydrate transport and metabolism

E

295

7.44

Amino acid transport and metabolism

F

94

2.37

Nucleotide transport and metabolism

H

132

3.33

Coenzyme transport and metabolism

I

129

3.25

Lipid transport and metabolism

P

186

4.69

Inorganic ion transport and metabolism

Q

71

1.79

Secondary metabolites biosynthesis, transport and catabolism

R

433

10.92

General function prediction only

S

353

8.9

Function unknown

-

508

12.81

Not in COGs

  1. aThe percentage is based on the total number of protein-coding genes in the annotated genome