Table 4 Number of genes associated with general COG functional categories
From: Genome sequence and description of Pantoea septica strain FF5
Code | Value | % age | Description |
|---|---|---|---|
J | 173 | 4.19 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 274 | 6.64 | Transcription |
L | 118 | 2.86 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 33 | 0.80 | Cell cycle control, Cell division, chromosome partitioning |
V | 41 | 0.99 | Defense mechanisms |
T | 99 | 2.40 | Signal transduction mechanisms |
M | 191 | 4.63 | Cell wall/membrane biogenesis |
N | 41 | 0.99 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
U | 34 | 0.82 | Intracellular trafficking and secretion |
O | 113 | 2.73 | Posttranslational modification, protein turnover, chaperones |
C | 186 | 4.50 | Energy production and conversion |
G | 233 | 5.65 | Carbohydrate transport and metabolism |
E | 309 | 7.49 | Amino acid transport and metabolism |
F | 75 | 1.82 | Nucleotide transport and metabolism |
H | 113 | 2.74 | Coenzyme transport and metabolism |
I | 69 | 1.67 | Lipid transport and metabolism |
P | 207 | 5.01 | Inorganic ion transport and metabolism |
Q | 36 | 0.87 | Secondary metabolite biosynthesis, transport and catabolism |
R | 363 | 8.80 | General function prediction only |
S | 331 | 8.02 | Function unknown |
- | 522 | 12.65 | Not in COGs |