Table 5 Number of genes associated with the 25 general COG functional categories
Code | Valuea | % of total | Description |
|---|---|---|---|
J | 197 | 5.37 | Translation, ribosomal structure and biogenesis |
A | 4 | 0.12 | RNA processing and modification |
K | 263 | 7.18 | Transcription |
L | 173 | 4.73 | Replication, recombination and repair |
B | 4 | 0.12 | Chromatin structure and dynamics |
D | 56 | 1.54 | Cell cycle control, cell division, chromosome partitioning |
Y | 1 | 0.02 | Nuclear structure |
V | 71 | 1.93 | Defense mechanisms |
T | 166 | 4.53 | Signal transduction mechanisms |
M | 193 | 5.27 | Cell wall/membrane biogenesis |
N | 81 | 2.2 | Cell motility |
Z | 4 | 0.12 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 75 | 2.05 | Intracellular trafficking and secretion, and vesicular transport |
O | 114 | 3.12 | Posttranslational modification, protein turnover, chaperones |
C | 181 | 4.95 | Energy production and conversion |
G | 240 | 6.56 | Carbohydrate transport and metabolism |
E | 298 | 8.12 | Amino acid transport and metabolism |
F | 91 | 2.48 | Nucleotide transport and metabolism |
H | 113 | 3.07 | Coenzyme transport and metabolism |
I | 103 | 2.8 | Lipid transport and metabolism |
P | 214 | 5.84 | Inorganic ion transport and metabolism |
Q | 62 | 1.68 | Secondary metabolites biosynthesis, transport and catabolism |
R | 475 | 12.97 | General function prediction only |
S | 484 | 13.2 | Function unknown |