Table 4 Number of genes associated with the 25 general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 158 | 6.17 | Translation, ribosomal structure and biogenesis |
A | 2 | 0.08 | RNA processing and modification |
K | 126 | 4.92 | Transcription |
L | 164 | 6.41 | Replication, recombination and repair |
B | 1 | 0.04 | Chromatin structure and dynamics |
D | 30 | 1.17 | Cell cycle control, Cell division, chromosome partitioning |
V | 32 | 1.25 | Defense mechanisms |
T | 120 | 4.69 | Signal transduction mechanisms |
M | 181 | 7.07 | Cell wall/membrane biogenesis |
N | 49 | 1.91 | Cell motility |
U | 100 | 3.91 | Intracellular trafficking and secretion |
O | 145 | 5.66 | Posttranslational modification, protein turnover, chaperones |
C | 206 | 8.05 | Energy production and conversion |
G | 110 | 4.30 | Carbohydrate transport and metabolism |
E | 167 | 6.52 | Amino acid transport and metabolism |
F | 63 | 2.46 | Nucleotide transport and metabolism |
H | 119 | 4.65 | Coenzyme transport and metabolism |
I | 65 | 2.54 | Lipid transport and metabolism |
P | 150 | 5.86 | Inorganic ion transport and metabolism |
Q | 38 | 1.48 | Secondary metabolites biosynthesis, transport and catabolism |
R | 282 | 11.02 | General function prediction only |
S | 252 | 9.84 | Function unknown |
- | 1351 | 36.72 | Not in COGs |