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Table 3 Genome statistics

From: Draft genome sequence of a nitrate-reducing, o-phthalate degrading bacterium, Azoarcus sp. strain PA01T

Attribute Value % of Totala
Genome size (bp) 3,908,237 100.00 %
DNA coding (bp) 3,511,692 89.95 %
DNA G + C (bp) 2,582,614 66.08 %
DNA scaffolds 4  
Total genes 3,712 100.00 %
Protein coding genes 3,625 97.66 %
RNA genes 87 2.43 %
Pseudo genes 13 0.35 %
Genes with function predictions 3,100 83.51 %
Genes without function prediction 525 14.14 %
Genes assigned to COGs 2,579 69.48 %
Genes with Pfam domains 3,178 85.61
Genes with signal peptides 311 8.38 %
Genes with transmembrane helices 829 22.33 %
CRISPR repeats 1  
  1. aThe total is based on either the size of the genome in the base pairs or the total number of protein coding genes in the annonated genome