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Table 3 Genome statistics

From: Draft genome sequence of a nitrate-reducing, o-phthalate degrading bacterium, Azoarcus sp. strain PA01T

Attribute

Value

% of Totala

Genome size (bp)

3,908,237

100.00 %

DNA coding (bp)

3,511,692

89.95 %

DNA G + C (bp)

2,582,614

66.08 %

DNA scaffolds

4

 

Total genes

3,712

100.00 %

Protein coding genes

3,625

97.66 %

RNA genes

87

2.43 %

Pseudo genes

13

0.35 %

Genes with function predictions

3,100

83.51 %

Genes without function prediction

525

14.14 %

Genes assigned to COGs

2,579

69.48 %

Genes with Pfam domains

3,178

85.61

Genes with signal peptides

311

8.38 %

Genes with transmembrane helices

829

22.33 %

CRISPR repeats

1

 
  1. aThe total is based on either the size of the genome in the base pairs or the total number of protein coding genes in the annonated genome