Table 4 Number of genes associated with the 25 general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 148 | 7.09 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.05 | RNA processing and modification |
K | 70 | 3.36 | Transcription |
L | 98 | 4.70 | Replication, recombination and repair |
B | 2 | 0.10 | Chromatin structure and dynamics |
D | 32 | 1.53 | Cell cycle control, Cell division, chromosome partitioning |
V | 29 | 1.39 | Defense mechanisms |
T | 105 | 5.03 | Signal transduction mechanisms |
M | 153 | 7.33 | Cell wall/membrane biogenesis |
N | 73 | 3.50 | Cell motility |
U | 72 | 3.45 | Intracellular trafficking and secretion |
O | 109 | 5.23 | Posttranslational modification, protein turnover, chaperones |
C | 148 | 7.09 | Energy production and conversion |
G | 82 | 3.93 | Carbohydrate transport and metabolism |
E | 145 | 6.95 | Amino acid transport and metabolism |
F | 60 | 2.88 | Nucleotide transport and metabolism |
H | 131 | 6.28 | Coenzyme transport and metabolism |
I | 86 | 3.02 | Lipid transport and metabolism |
P | 105 | 5.03 | Inorganic ion transport and metabolism |
Q | 37 | 1.77 | Secondary metabolites biosynthesis, transport and catabolism |
R | 228 | 10.93 | General function prediction only |
S | 195 | 9.35 | Function unknown |
- | 792 | 29.59 | Not in COGs |