Skip to main content

Table 5 Number of genes associated with general COG functional categories

From: Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park

Code Value Percent Description
J 149 5.59 Translation, ribosomal structure and biogenesis
A 0 0 RNA processing and modification
K 180 6.76 Transcription
L 156 5.86 Replication, recombination and repair
B 1 0.04 Chromatin structure and dynamics
D 31 1.16 Cell cycle control, cell division, chromosome partitioning
V 36 1.35 Defense mechanisms
T 124 4.65 Signal transduction mechanisms
M 104 3.90 Cell wall/membrane/envelope biogenesis
N 58 2.18 Cell motility
U 46 1.73 Intracellular trafficking, secretion, and vesicular transport
O 81 3.04 Posttranslational modification, protein turnover, chaperones
C 157 5.89 Energy production and conversion
G 193 7.24 Carbohydrate transport and metabolism
E 258 9.68 Amino acid transport and metabolism
F 71 2.07 Nucleotide transport and metabolism
H 126 4.73 Coenzyme transport and metabolism
I 118 4.43 Lipid transport and metabolism
P 121 4.54 Inorganic ion transport and metabolism
Q 70 2.63 Secondary metabolites biosynthesis, transport and catabolism
R 304 11.41 General function prediction only
S 280 10.51 Function unknown
  1336 35.63 Not in COGs
  1. The total is based on the total number of protein coding genes in the annotated genome