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Table 1 Classification and general features of Cupriavidus sp. strain AMP6 in accordance with the MIGS recommendations [28] published by the Genome Standards Consortium [47]

From: High-quality permanent draft genome sequence of the Mimosa asperata - nodulating Cupriavidus sp. strain AMP6

MIGS ID

Property

Term

Evidence code

 

Classification

Domain Bacteria

TAS [48]

  

Phylum Proteobacteria

TAS [49, 50]

  

Class Betaproteobacteria

TAS [51]

  

Order Burkholderiales

TAS [52]

  

Family Burkholderiaceae

TAS [53]

  

Genus Cupriavidus

TAS [54]

  

Species Cupriavidus sp.

TAS [12]

  

(Type) strain AMP6

TAS [12]

 

Gram stain

Negative

TAS [54]

 

Cell shape

Rod

IDA

 

Motility

Motile

IDA

 

Sporulation

Non-sporulating

TAS [54]

 

Temperature range

Mesophile

TAS [54]

 

Optimum temperature

28 °C

IDA

 

pH range; Optimum

Not reported

 
 

Carbon source

Not reported

 

MIGS-6

Habitat

Soil, root nodule on host

IDA

MIGS-6.3

Salinity

Not reported

 

MIGS-22

Oxygen requirement

Aerobic

IDA

MIGS-15

Biotic relationship

Symbiotic

IDA

MIGS-14

Pathogenicity

Non-pathogenic

NAS

MIGS-4

Geographic location

Texas, USA

TAS [12]

MIGS-5

Nodule collection date

2005

TAS [12]

MIGS-4.1

Longitude

−98.138

TAS [12]

MIGS-4.2

Latitude

26.0794

TAS [12]

MIGS-4.4

Altitude

30 m

IDA

  1. Evidence codes – IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [55]